植物内生菌定殖检测技术及其应用

文章正文
发布时间:2024-10-12 13:34

1   TRIVEDI P, LEACH J E, TRINGE S G, et al.. Plant-microbiome interactions: from community assembly to plant health[J]. Nat. Rev. Microbiol., 2020, 18(11): 607-621.  
2   AFZAL I, SHINWARI Z K, SIKANDAR S, et al.. Plant beneficial endophytic bacteria: mechanisms, diversity, host range and genetic determinants[J]. Microbiol. Res., 2019, 221:36-49.  
3   NAIK B S. Functional roles of fungal endophytes in host fitness during stress conditions[J]. Symbiosis, 2019, 79(2): 99-115.  
4   PINSKI A, BETEKHTIN A, HUPERT-KOCUREK K, et al.. Defining the genetic basis of plant-endophytic bacteria interactions[J/OL]. Int. J. Mol. Sci., 2019, 20:1947[2022-12-05]. .  
5   COMPANT S, REITER B, SESSITSCH A, et al.. Endophytic colonization of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN[J]. Appl. Environ. Microbiol., 2005, 71(4): 1685-1693.  
6   SA R B, ZHANG J L, SUN J Z, et al.. Colonization characteristics of poplar fungal disease biocontrol bacteria N6-34 and the inhibitory effect on pathogenic fungi by real-time fluorescence quantitative PCR detection[J]. Curr. Microbiol., 2021, 78(8): 2916-2925.  
7   WANG B, WAN C X, ZENG H. Colonization on cotton plants with a GFP labeled strain of Bacillus axarquiensis [J]. Curr. Microbiol., 2020, 77(10): 3085-3094.  
8   XU J X, LI Z Y, LV X, et al.. Isolation and characterization of Bacillus subtilis strain 1-L-29, an endophytic bacteria from Camellia oleifera with antimicrobial activity and efficient plant-root colonization[J/OL]. PLoS ONE, 2020, 15(4):0232096[2022-12-05]. .  
9   张玮川, 李剑, 王志宇, 等. 内生菌-植物联合修复污染土壤研究进展[J]. 农业资源与环境学报, 2021, 38 (3): 10-17.  
10   王吉永, 郭龙妹, 高林怡, 等. 植物内生菌的侵染定殖研究概况[J]. 江苏农业科学, 2019, 47(14): 36-39.  
11   李爽, 左尚武, 王万清, 等. 菌株Serratia sp. PW7不同定殖方式对黑麦草中芘污染去除及其内生菌群的影响[J]. 农业环境科学学报, 2018, 37(12): 2755-2764.  
12   ZHOU J, HUANG P W, LI X, et al.. Generalist endophyte phomopsis liquidambaris colonization of Oryza sativa L.promotes plant growth under nitrogen starvation[J]. Plant Mol. Biol., 2022, 109(6): 703-715.  
13   NAVEED M, MITTER B, REICHENAUER T G, et al.. Increased drought stress resilience of maize through endophytic colonization by Burkholderia phytofirmans PsJN and Enterobacter sp. FD17[J]. Environ. Exp. Bot., 2014, 97: 30-39.  
14   FRANK A C, GUZMAN J P S, SHAY J E. Transmission of bacterial endophytes[J/OL]. Microorganisms, 2017, 5(4): 70[2022-12-05]. .  
15   ANYASI R O, ATAGANA H I, SUTHERLAND R. Comparative study of the colonization of chromolaena and tobacco plants by Bacteria safensis CS4 using different methods of inoculation[J]. Pakistan J. Biol. Sci., 2019, 22(7): 309-317.  
16   陈超琼. 骆驼刺内生细菌新种Pantoea alhagi LTYR-11Z的鉴定及其促作物抗旱机制初步研究[D]. 咸阳:西北农林科技大学, 2017.  
17   VAISHNAV A, SHUKLA A K, SHARMA A, et al.. Endophytic bacteria in plant salt stress tolerance: current and future prospects[J]. J. Plant Growth Regul., 2019, 38(2): 650-668.  
18   WADHAMS G H, ARMITAGE J P. Making sense of it all: bacterial chemotaxis[J]. Nat. Rev. Mol. Cell Biol., 2004, 5(12): 1024-1037.  
19   JIA Y, FU W Q, XU M, et al.. Colonization cues of leaf-and root-inhabiting bacterial microbiota of Atractylodes lancea derived in vitro and in vivo[J]. Plant Soil, 2018, 430(1-2): 49-58.  
20   LIU H W, CARVALHAIS L C, CRAWFORD M, et al.. Inner plant values: diversity, colonization and benefits from endophytic bacteria[J/OL]. Front. Microbiol., 2017, 8: 2552[2022-12-05]. .  
21   王雪菲. 解磷细菌YL6在小白菜植株中的定殖及促生机制研究[D]. 咸阳:西北农林科技大学, 2019.  
22   赵明富, 李梦娇, 张芬芬, 等. 变栖克雷伯菌在石斛体内的定殖动态及其对石斛黑斑病的防效试验[J]. 西南林业大学学报, 2015, 35(3): 14-19.  
23   ALBORNOZ F E, PROBER S M, RYAN M H, et al.. Ecological interactions among microbial functional guilds in the plant-soil system and implications for ecosystem function[J]. Plant Soil, 2022, 476: 301-313.  
24   MORELLI M, BAHAR O, PAPADOPOULOU K K, et al.. Editorial: role of endophytes in plant health and defense against pathogens[J/OL]. Front. Plant Sci., 2020, 11: 1312[2022-12-05]. .  
25   MULLENS A, JAMANN T M. Colonization and movement of green fluorescent protein-labeled clavibacter nebraskensis in maize[J]. Plant Dis., 2021, 105(5): 1422-1431.  
26   方珍娟, 张晓霞, 马立安. 植物内生菌研究进展[J]. 长江大学学报(自科版), 2018, 15(10): 41-45.  
27   祁超, 寸海春, 何鹏飞, 等. 生防菌YN201490在黄瓜植株体内的定殖能力及防病机制的初步研究[J]. 云南大学学报(自然科学版), 2019, 41(1): 172-180.  
28   QUECINE M C, ARAUJO W L, ROSSETTO P B, et al.. Sugarcane growth promotion by the endophytic bacterium pantoea agglomerans 33.1[J]. Appl. Environ. Microbiol., 2012, 78(21): 7511-7518.  
29   KRZYZANOWSKA D, OBUCHOWSKI M, BIKOWSKI M, et al.. Colonization of potato rhizosphere by GFP-Tagged Bacillus subtilis MB73/2, Pseudomonas sp. P482 and Ochrobactrum sp. A44 shown on large sections of roots using enrichment sample preparation and confocal laser scanning microscopy[J]. Sensors, 2012, 12(12): 17608-17619.  
30   BUDA G J, ISAACSON T, MATAS A J, et al.. Three-dimensional imaging of plant cuticle architecture using confocal scanning laser microscopy[J]. Plant J., 2009, 60(2): 378-385.  
31   沙月霞, 张昂, 伍顺华, 等. 假单胞菌S149对水稻防御酶的诱导及定殖能力[J]. 中国植保导刊, 2020, 40(7): 10-16.  
32   王军强, 汪晶晶, 王琦, 等. 海洋细菌L1-9双抗菌株的定殖能力及其对黄瓜枯萎病的防治作用[J]. 生物技术通报, 2016, 32(6): 193-198.  
33   李全芬, 张婷婷, 马磊. 羽毛针禾根部内生假单胞菌XG11在小麦上的定殖动态及促生效应[J]. 江苏农业科学, 2022, 50(3): 219-224.  
34   郭继平, 马光, 王芳芳, 等. 解淀粉芽孢杆菌在葡萄叶片上的定殖能力研究[J]. 吉林农业科学, 2015, 40(4): 90-93.  
35   STAKHEEV A A, RYAZANTSEV D Y, ZVEZDINA Y K, et al.. A novel fluorescent GFP chromophore analog-based dye for quantitative PCR[J]. Biochem. Moscow, 2018, 83(7): 855-860.  
36   LIN Q, DI Y P. Determination and quantification of bacterial virulent gene expression using quantitative real-time PCR[J]. Methods Mol. Biol. (Clifton, NJ), 2020, 2102: 177-193.  
37   TAJADINI M, PANJEHPOUR M, JAVANMARD S H. Comparison of SYBR green and TaqMan methods in quantitative real-time polymerase chain reaction analysis of four adenosine receptor subtypes[J]. Adv. Biomed. Res., 2014, 3:85.  
38   陈飞飞, 黄金思, 王翕韫, 等. 吡咯伯克霍尔德氏菌JK-SH007多聚半乳糖醛酸酶基因的克隆及表达分析[J]. 南京林业大学学报(自然科学版), 2018, 42(4): 127-133.  
39   ZIAROVSKA J, MEDO J, KYSEL M, et al.. Endophytic bacterial microbiome diversity in early developmental stage plant tissues of wheat varieties[J/OL]. Plants Basel., 2020, 9(2): 266[2022-12-05]. .  
40   THOMAS P, SEKHAR A C. Cultivation versus molecular analysis of banana (Musa sp.) shoot-tip tissue reveals enormous diversity of normally uncultivable endophytic bacteria[J]. Microb. Ecol., 2017, 73(4): 885-899.  
41   KONG X, JIN D, TAI X, et al.. Bioremediation of dibutyl phthalate in a simulated agricultural ecosystem by Gordonia sp. strain QH-11 and the microbial ecological effects in soil[J]. Sci. Total Environ., 2019, 667(1): 691-700.  
42   庞杰, 刘月敏, 黄永春, 等. 1株草螺属植物内生菌R-13的分离鉴定及对龙葵吸收土壤镉的影响[J]. 环境科学, 2021, 42(9): 4471-4480.  
43   萨仁格日勒. 两种生境下山羽藓(Abietinella abietina)内生细菌多样性研究[D]. 呼和浩特:内蒙古大学, 2017.  
44   彭芳芳, 魏召新, 李勋兰,等. 基于高通量测序分析感染菌核病和健康桑果内生菌群落结构及多样性[J]. 食品科学, 2021, 42 (20): 61-68.  
45   GILAD Y, PRITCHARD J K, THORNTON K. Characterizing natural variation using next-generation sequencing technologies[J]. Trends Genet., 2009, 25(10): 463-471.  
46   路国兵, 张瑶, 冀宪领, 等. 植物内生细菌的侵染定殖规律研究进展[J]. 生物技术通报, 2007, 3: 88-92.  
47   刘佳怡, 王嘉欣, 宋海超,等. 纳他霉素对芒果采后胶孢炭疽菌的抑菌效果及机理[J]. 植物学报, 2019, 54(4): 455-463.  
48   ZELLER P, PLOUX O, MEJEAN A. A simple protocol for attenuating the auto-fluorescence of cyanobacteria for optimized fluorescence in situ hybridization (FISH) imaging[J]. J. Microbiol. Methods, 2016, 122: 16-19.  
49   LòPEZ-FERNàNDEZ S, COMPANT S, VRHOVSEK U, et al.. Grapevine colonization by endophytic bacteria shifts secondary metabolism and suggests activation of defense pathways[J]. Plant Soil, 2016, 405(1): 155-175.  
50   缪海珍, 朱水芳, 张谦, 等. 采用基因芯片技术筛查农作物转基因背景[J]. 复旦学报(自然科学版), 2003 (4): 634-637.  
51   焦蓉, 何鹏飞, 王戈, 等. 内生菌YN201728的定殖能力及其防治烟草白粉病的效果研究[J]. 核农学报, 2020(4): 721-728.  
52   孙真, 郑亮, 邱浩斌. 植物根际促生细菌定殖研究进展[J]. 生物技术通报,2017, 33(2): 8-15.  
53   蔡学清. 内生枯草芽孢杆菌BS-2(Bacillus subtilis)在植物体内的定殖及促生作用[D]. 福州:福建农林大学,2005.  
54   张亚旭, 刘紫烟. 荧光PCR扩增相关技术[J]. 中国生物化学与分子生物学报, 2021, 37(7): 890-899.  
55   SILVA M F D, GONÇALVES M C, BRITO M D S, et al.. Reference genes for gene expression studies targeting sugarcane infected with sugarcane mosaic virus[J/OL].BMC Res. Notes, 2019, 12(1): 149[2022-12-05]. .  
56   MORALES-CEDENO L R, OROZCO-MOSQUEDA M D, LOEZA-LARA P D, et al.. Plant growth-promoting bacterial endophytes as biocontrol agents of pre- and post-harvest diseases: fundamentals, methods of application and future perspectives[J/OL]. Microbiol. Res., 2021, 242:126612[2022-12-05]. .  
57   FAN B, WANG C, SONG X F, et al.. Bacillus velezensis FZB42 in 2018: the gram-positive model strain for plant growth promotion and biocontrol[J/OL]. Front. Microbiol., 2018, 9:2491[2022-12-05]. .  
58   程媛媛, 雍彬, 张超, 等. 华重楼内生菌抗菌肽的分离纯化及其特性[J]. 微生物学报, 2009, 49(4): 498-503.  
59   陈炜. 植物内生细菌BS-2和TB2在荔枝体内的定殖及对荔枝霜霉病的防治[D]. 福州:福建农林大学, 2009.  
60   GU S H, WEI Z, SHAO Z Y, et al.. Competition for iron drives phytopathogen control by natural rhizosphere microbiomes[J]. Nat. Microbiol., 2020, 5(8): 1002-1010.  
61   TZIPILEVICH E, RUSS D, DANGL J L, et al.. Plant immune system activation is necessary for efficient root colonization by auxin-secreting beneficial bacteria[J]. Cell Host Microbe., 2021, 29(10): 1507-1520.  
62   喻江, 于镇华, 刘晓冰, 等. 植物根组织内生细菌多样性及其促生作用[J]. 中国农学通报, 2015, 31(13): 169-175.  
63   VANDANA U K, RAJKUMARI J, SINGHA L P, et al.. The endophytic microbiome as a hotspot of synergistic interactions, with prospects of plant growth promotion[J/OL]. Biol. Basel, 2021, 10(2): 101[2022-12-05]. .  
64   WANG J, ZHANG X F, LING W T, et al.. Contamination and health risk assessment of PAHs in soils and crops in industrial areas of the Yangtze River Delta region, China[J]. Chemosphere, 2017, 168: 976-987.  
65   WAIGI M G, WANG J, YANG B, et al.. Endophytic bacteria in planta organopollutant detoxification in crops[J]. Rev. Environ. Contam. Toxicol. ,2020,252: 1-50.  
66   LIU J, ZHANG Z M, SHENG Y H, et al.. Phenanthrene-degrading bacteria on root surfaces: a natural defense that protects plants from phenanthrene contamination[J]. Plant Soil, 2018, 425(1-2): 335-350.  
67   LIU L H, YUAN T, ZHANG J Y, et al.. Diversity of endophytic bacteria in wild rice (Oryza meridionalis) and potential for promoting plant growth and degrading phthalates[J/OL]. Sci. Total Environ., 2022, 806(1): 150310[2022-12-05]. .  
68   ZHU X Z, WANG W Q, SUN K, et al.. Inoculating wheat (Triticum aestivum L.) with the endophytic bacterium Serratia sp. PW7 to reduce pyrene contamination[J]. Int. J. Phytoremed., 2017, 19(8): 718-724.  
69   ABDOU R, ALQAHTANI A M, ATTIA G H. Anticancer natural products from Aspergillus neoniger, an endophyte of Ficus carica [J]. Bull. Nat. Res. Centre,2021, 45(1): 1-6.  
71   PACHÚ J K S, MACEDO F C O, SILVA F B D, et al.. Imidacloprid-mediated stress on non-Bt and Bt cotton, aphid and ladybug interaction: approaches based on insect behaviour, fluorescence, dark respiration and plant electrophysiology[J/OL].Chemosphere, 2021, 263: 127561[2022-12-05]. .  
72   YA L, QI W, LU W, et al.. Increased growth and root Cu accumulation of sorghum sudanense by endophytic Enterobacter sp. K3-2: implications for sorghum sudanense biomass production and phytostabilization[J]. Ecotoxicol. Environ. Safety, 2016, 124: 163-168.